python数据透视、有的value不能同时输出_python – Pandas数据透视表ValueError:索引包含重复的条目,无法重新整形...
我有一個如下所示的數據幀(前3行):
Sample_Name Sample_ID Sample_Type IS Component_Name IS_Name Component_Group_Name Outlier_Reasons Actual_Concentration Area Height Retention_Time Width_at_50_pct Used Calculated_Concentration Accuracy
Index
1 20170824_ELN147926_HexLacCer_Plasma_A-1-1 NaN Unknown True GluCer(d18:1/12:0)_LCB_264.3 NaN NaN NaN 0.1 2.733532e+06 5.963840e+05 2.963911 0.068676 True NaN NaN
2 20170824_ELN147926_HexLacCer_Plasma_A-1-1 NaN Unknown True GluCer(d18:1/17:0)_LCB_264.3 NaN NaN NaN 0.1 2.945190e+06 5.597470e+05 2.745026 0.068086 True NaN NaN
3 20170824_ELN147926_HexLacCer_Plasma_A-1-1 NaN Unknown False GluCer(d18:1/16:0)_LCB_264.3 GluCer(d18:1/17:0)_LCB_264.3 NaN NaN NaN 3.993535e+06 8.912731e+05 2.791991 0.059864 True 125.927659773487 NaN
嘗試生成數據透視表時:
pivoted_report_conc = raw_report.pivot(index = "Sample_Name", columns = 'Component_Name', values = "Calculated_Concentration")
我收到以下錯誤:
ValueError: Index contains duplicate entries, cannot reshape
我嘗試重置索引但它沒有幫助.我在“索引”列中找不到任何重復值.有人可以幫忙找出問題嗎?
預期的輸出將是一個重新整形的數據框,只有唯一的組件名稱作為列和每個樣本名稱的相應濃度:
Sample_Name GluCer(d18:1/12:0)_LCB_264.3 GluCer(d18:1/17:0)_LCB_264.3 GluCer(d18:1/16:0)_LCB_264.3
20170824_ELN147926_HexLacCer_Plasma_A-1-1 NaN NaN 125.927659773487
為了澄清,我不打算聚合數據,只是重塑它.
解決方法:
您可以使用groupby()和unstack()來繞過您在pivot()中看到的錯誤.
這是一些示例數據,添加了一些邊緣情況,并刪除了一些列值或替換為MCVE:
# df
Sample_Name Sample_ID IS Component_Name Calculated_Concentration Outlier_Reasons
Index
1 foo NaN True x NaN NaN
1 foo NaN True y NaN NaN
2 foo NaN False z 125.92766 NaN
2 bar NaN False x 1.00 NaN
2 bar NaN False y 2.00 NaN
2 bar NaN False z NaN NaN
(df.groupby(['Sample_Name','Component_Name'])
.Calculated_Concentration
.first()
.unstack()
)
輸出:
Component_Name x y z
Sample_Name
bar 1.0 2.0 NaN
foo NaN NaN 125.92766
標簽:python,pandas
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